{ "_id": "6a17dd34acfb0bcc41d9c759", "Package": "ssdtools", "Title": "Species Sensitivity Distributions", "Version": "2.6.0.9002", "Authors@R": "c(\nperson(\"Joe\", \"Thorley\", , \"joe@poissonconsulting.ca\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-7683-4592\")),\nperson(\"Rebecca\", \"Fisher\", , \"R.Fisher@aims.gov.au\", role = \"aut\"),\nperson(\"David\", \"Fox\", , \"david.fox@environmetrics.net.au\", role = \"aut\"),\nperson(\"Carl\", \"Schwarz\", role = \"aut\"),\nperson(\"Angeline\", \"Tillmanns\", role = \"ctb\"),\nperson(\"Seb\", \"Dalgarno\", , \"seb@poissonconsulting.ca\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-3658-4517\")),\nperson(\"Kathleen\", \"McTavish\", role = \"ctb\"),\nperson(\"Heather\", \"Thompson\", role = \"ctb\"),\nperson(\"Doug\", \"Spry\", role = \"ctb\"),\nperson(\"Rick\", \"van Dam\", role = \"ctb\"),\nperson(\"Graham\", \"Batley\", role = \"ctb\"),\nperson(\"Ali\", \"Azizishirazi\", role = \"ctb\"),\nperson(\"Nadine\", \"Hussein\", , \"nadine@poissonconsulting.ca\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0003-4470-8361\")),\nperson(\"Sarah\", \"Lyons\", , \"sarah@poissonconsulting.ca\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-6745-6796\")),\nperson(\"Duncan\", \"Kennedy\", , \"duncan@poissonconsulting.ca\", role = \"ctb\",\ncomment = c(ORCID = \"0009-0001-4880-5751\")),\nperson(\"Stephanie\", \"Hazlitt\", role = \"ctb\"),\nperson(\"Hadley\", \"Wickham\", role = \"ctb\"),\nperson(\"Sergio\", \"Ibarra Espinosa\", role = \"ctb\"),\nperson(\"Andy\", \"Teucher\", role = \"ctb\"),\nperson(\"Emilie\", \"Doussantousse\", role = \"ctb\"),\nperson(\"Nan-Hung\", \"Hsieh\", role = \"ctb\"),\nperson(\"Florencia\", \"D'Andrea\", role = \"ctb\"),\nperson(\"Eduard\", \"Szöcs\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0001-5376-1194\")),\nperson(\"Province of British Columbia\", role = c(\"fnd\", \"cph\")),\nperson(\"Environment and Climate Change Canada\", role = c(\"fnd\", \"cph\")),\nperson(\"Australian Government Department of Climate Change, Energy, the Environment and Water\", role = c(\"fnd\", \"cph\"))\n)", "Description": "Species sensitivity distributions are cumulative\nprobability distributions which are fitted to toxicity\nconcentrations for different species as described by Posthuma\net al.(2001) . The ssdtools package uses\nMaximum Likelihood to fit distributions such as the gamma,\nlog-logistic, log-normal and log-normal log-normal mixture.\nMultiple distributions can be averaged using Akaike Information\nCriteria. Confidence intervals on hazard concentrations and\nproportions are produced by bootstrapping.", "License": "Apache License (== 2.0) | file LICENSE", "URL": "https://github.com/bcgov/ssdtools,\nhttps://bcgov.github.io/ssdtools/", "BugReports": "https://github.com/bcgov/ssdtools/issues", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "Encoding": "UTF-8", "Language": "en-US", "LazyData": "true", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3.9000", "Config/pak/sysreqs": "libicu-dev libjpeg-dev libpng-dev libxml2-dev\nlibssl-dev libx11-dev", "Repository": "https://bcgov.r-universe.dev", "Date/Publication": "2026-04-28 16:34:52 UTC", "RemoteUrl": "https://github.com/bcgov/ssdtools", "RemoteRef": "HEAD", "RemoteSha": "d4865f65c73bd453e25f96821e991f7da23520d5", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-05-28 06:00:47 UTC", "User": "root" }, "Author": "Joe Thorley [aut, cre] (ORCID: ),\nRebecca Fisher [aut],\nDavid Fox [aut],\nCarl Schwarz [aut],\nAngeline Tillmanns [ctb],\nSeb Dalgarno [ctb] (ORCID: ),\nKathleen McTavish [ctb],\nHeather Thompson [ctb],\nDoug Spry [ctb],\nRick van Dam [ctb],\nGraham Batley [ctb],\nAli Azizishirazi [ctb],\nNadine Hussein [ctb] (ORCID: ),\nSarah Lyons [ctb] (ORCID: ),\nDuncan Kennedy [ctb] (ORCID: ),\nStephanie Hazlitt [ctb],\nHadley Wickham [ctb],\nSergio Ibarra Espinosa [ctb],\nAndy Teucher [ctb],\nEmilie Doussantousse [ctb],\nNan-Hung Hsieh [ctb],\nFlorencia D'Andrea [ctb],\nEduard Szöcs [ctb] (ORCID: ),\nProvince of British Columbia [fnd, cph],\nEnvironment and Climate Change Canada [fnd, cph],\nAustralian Government Department of Climate Change, Energy, the\nEnvironment and Water [fnd, cph]", "Maintainer": "Joe Thorley ", "MD5sum": "776643788a67d700ae9e6b9ee029223b", "_user": "bcgov", "_type": "src", "_file": "ssdtools_2.6.0.9002.tar.gz", "_fileid": "a6fb21a944d4a9479bd790a2282e1340e01f4cf814c03c6960e528de5c45f424", "_filesize": 2482658, "_sha256": 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Intersection", "concept": [ "ggplot" ], "topics": [ "geom_hcintersect" ] }, { "page": "geom_ssdpoint", "title": "Species Sensitivity Data Points", "concept": [ "ggplot" ], "topics": [ "geom_ssdpoint" ] }, { "page": "geom_ssdsegment", "title": "Species Sensitivity Censored Segments", "concept": [ "ggplot" ], "topics": [ "geom_ssdsegment" ] }, { "page": "geom_xribbon", "title": "Ribbon on X-Axis", "concept": [ "ggplot" ], "topics": [ "geom_xribbon" ] }, { "page": "glance.fitdists", "title": "Get a tibble summarizing each distribution", "concept": [ "generics" ], "topics": [ "glance.fitdists" ] }, { "page": "is.fitdists", "title": "Is fitdists Object", "topics": [ "is.fitdists" ] }, { "page": "predict.fitburrlioz", "title": "Predict Hazard Concentrations of fitburrlioz Object", "topics": [ "predict.fitburrlioz" ] }, { "page": "predict.fitdists", "title": "Predict Hazard Concentrations of fitdists Object", "topics": [ "predict.fitdists" ] }, { "page": "scale_colour_ssd", "title": "Discrete color-blind scale for SSD Plots", "concept": [ "ggplot" ], "topics": [ "scale_color_ssd", "scale_colour_ssd", "scale_fill_ssd" ] }, { "page": "ssd_at_boundary", "title": "Is At Boundary", "topics": [ "ssd_at_boundary", "ssd_at_boundary.fitdists", "ssd_at_boundary.tmbfit" ] }, { "page": "ssd_censor_data", "title": "Censor Data", "topics": [ "ssd_censor_data" ] }, { "page": "ssd_computable", "title": "Is Computable Standard Errors", "topics": [ "ssd_computable", "ssd_computable.fitdists", "ssd_computable.tmbfit" ] }, { "page": "ssd_data", "title": "Data from fitdists Object", "topics": [ "ssd_data" ] }, { "page": "ssd_dists", "title": "Species Sensitivity Distributions", "concept": [ "dists" ], "topics": [ "ssd_dists" ] }, { "page": "ssd_dists_all", "title": "All Species Sensitivity Distributions", "concept": [ "dists" ], "topics": [ "ssd_dists_all" ] }, { "page": "ssd_dists_bcanz", "title": "BCANZ Distributions", "concept": [ "dists BCANZ" ], "topics": [ "ssd_dists_bcanz" ] }, { "page": "ssd_dists_shiny", "title": "All Shiny Species Sensitivity Distributions", "concept": [ "dists" ], "topics": [ "ssd_dists_shiny" ] }, { "page": "ssd_e", "title": "Default Parameter Estimates", "topics": [ "ssd_e", "ssd_eburrIII3", "ssd_egamma", "ssd_egompertz", "ssd_einvpareto", "ssd_elgumbel", "ssd_ellogis", "ssd_ellogis_llogis", "ssd_elnorm", "ssd_elnorm_lnorm", "ssd_emulti", "ssd_eweibull" ] }, { "page": "ssd_ecd", "title": "Empirical Cumulative Density", "topics": [ "ssd_ecd" ] }, { "page": "ssd_ecd_data", "title": "Empirical Cumulative Density for Species Sensitivity Data", "topics": [ "ssd_ecd_data" ] }, { "page": "ssd_exposure", "title": "Proportion Exposure", "topics": [ "ssd_exposure" ] }, { "page": "ssd_fit_bcanz", "title": "Fit BCANZ Distributions", "concept": [ "BCANZ" ], "topics": [ "ssd_fit_bcanz" ] }, { "page": "ssd_fit_burrlioz", "title": "Fit Burrlioz Distributions", "topics": [ "ssd_fit_burrlioz" ] }, { "page": "ssd_fit_dists", "title": "Fit Distributions", "topics": 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